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CANCER, GENERAL OVERVIEW:
ONCOGENES: Cancer is
the result of a series of mutations that confer on one cell line (from a single cell) a number of properties
for which various biological constraints have been modified. The process is one
of genetic alteration via mutations that alter the DNA of a gene or through gross alteration of chromosome (see #9 below). A Gene that contributes to making a cell-line cancerous is called an oncogene.
The unchanged, normally functioning, version of that gene is called a proto-oncogene. There are 12 general types of functional
alterations (and thus 12 genetic changes[i]) that contribute to turning a single cell line into a life-threatening cancer; however, not all 12 must
be present.
1. Turning on of the chemical
signal which causes a cell to rapidly divide.
2. Turning
off of the chemical signal which turns stops a cell from rapidly dividing.
3. Stimulate
the formation of new capillaries to assure adequate oxygen supply for continued growth.
4. The
cell line must avoid senescence which occurs at around 50 to 70 generations, and thus become immortal. To do this it must curtail the telomerase control upon the number of divisions.[ii]
5. Invade
adjacent tissues: Most organs are enveloped in a membrane (muscles and lungs). Most cancers fairly early develop the ability to grow through the membrane and invade
adjacent tissues.
6. Metastasize: have microscopic colonies of the tumor relocate in other sites. It
must, in most cases, spread from its primary tissue to distant sites. This involves
sometimes a mutation affecting adhesiveness[iii] and sometimes also the markers on the cell wall.[iv] Over ninety percent of cancer deaths are due
to metastases.
7. Be
able to both enter and leave blood vessels like the way lymphocytes do by secreting a factor which allows them to enter a
capillary and then at another site to pass out of the capillary again by secreting this factor, a class of compounds know
as Src kinase.
8. Some
cancers have abnormal DNA due to gross changes in the chromosome that consist of translocation, duplication, deletion, or
inversion.[v] This type of abnormality results in the imperfect
expression of genes on that chromosome.
9. Another
way to speed up the timetable is the disabling of the gene which functions in mechanism that checks during cell mitosis that
accurate replication in the new chromosome of the DNA has occurred. Several such
genes, such as P53, have been identified. When disabled the risk of cancer in the cell types that rely upon that gene will
increase several fold. If the factor has been inherited the cancer type will
be common among relatives and often can occur unusually early. P53 is associated
with breast and several other types of cancer.
10. Excrete growth factors which
enable the cancer to attract stem cells which then help support the growth of the tumor by stimulating the growth of capillaries
and other structures needed to support a large tumor. This is a new finding,
one which explains the failure of treatments for some patients.
11. Express any of a number of
genes which give stem cells their unique properties. This is a new finding, one
which explains the failure of treatments for some patients.
12. Methylation of the DNA,
which primarily occurs during embyogenesis and development, has been associated with inaction of tumor suppressor genes. This occurs when the abnormal methylation alters a gene responsible for the checking
of the accuracy of the DNA replication.
Oncogensis:[vi] The
process in 2 occurs two ways, either by a defect in the DNA of one particular cell line or by the inheritance of a defect in a gene such
as P53. Inheritance accounts for no more than 10% of all cancers. Such a person often acquires cancer earlier than the norm for that type of cancer by accumulating mutations
more rapidly. All the cells of a tissue with the gene that checks replication,
for example that has been disabled are accumulating mutations in the DNA at an accelerated rate. If however, instead of being inherited the P53 has through random mutation has been disable, only the progeny
of that one cell are accumulating mutations at an accelerated rate, including those to the various oncogenes[vii] This later scenario occurs in 90% of
the cancers—inheritance accounts for under 10% of all cancers.
THERE ARE A LARGE NUMBER OF GENES WHICH CAN PLAY A ROLE IN THE PORDUCTION
OF A CACEROUS CELL LINE. Scientists have identified
over 100 genes that are involved in the twelve above processes. Since a gene
occurs on both strands of a chromosome, one inherited from the mother, the other from the father, normally the gene in each
strand must be altered by mutation. In some cancers however, the two alleles have not been disabled, but rather their production
reduced. The gross errors in chromosome replication (aneuploidy),
such as translocation, can alter the production of an oncogene. Often for a tumor,
the cells are not just aneuploidy, but also unstable, changing every few generations.
In about half of the aneuploidy cells, the mechanism involves the formation of spindles during mitosis.[viii] Cell biology is complex, and as I pointed out
over a decade ago and others still affirm, “each tumor is unique.”[ix]
RATE OF MUTATION: There are 4 scenarios for speeding
up the rate of mutations. One is a mutation in a single cell that
disables one of the systems that checks to see that during mitosis the newly formed mRNA and the DNA are as proscribed by
the parent strand of DNA. With this system disabled, the rate of mutations (imperfect
copies of the DNA or RNA) is increased that cell several fold. Second, this disabling
of all the cells due to an inherited mutation in that system. This occurs in
only a couple of percent, though such people typically run around a 90% risk of developing cancer in the affected tissue. A third one is through a cancer-causing retrovirus that has “hijacked”
proto-oncogenes from their host’s genome, mutating them in the process to make malfunctioning versions. “Only 15 percent of human cancers are caused by genes introduced by viruses” (Bailey
137). The fourth is environmental factors, namely mutagenic substances and radiation
including sunshine. The primary environmental one is in air filtered through
tobacco. Consistent with other later studies, Ravenholt (1983) found that there
were 450,000 premature deaths caused by tobacco, including 50,000 from second-hand smoke—a figure that has remained
constant over 3 decades.
CARCINOGENS ARE A CASUAL FACTOR THROUGH NATURAL SELECTION: A particular mutation or set of mutations will confer upon an exposed tissue survival advantage.[x] Cancerous cell mired in tobacco tars have a
survival advantage over normal tissue. Even when survival is not an issue, the
cancerous cells have a reproductive advantage, and thus crowd out or replace normal tissue.
In fact, which aneuploid cells survive is a result of natural selection, since most of them when formed anew are still
born or abnormally slow growing. A rare success case gives that cell line a selective advantage. Gene mutations and chromosome abnormalities, in rare instances, confer numerical advantage to a cell line.[xi]
NATURAL SELECTION PLAYS A ROLE IN RESISTANCE TO CHEMOTHERAPY: A cell line with the ability to undergo genetic alterations at high rate can become resistant to chemotherapy. Thus initial success evaporates when one of the cancerous cells undergoes a mutation
that makes it, and thus the new cell line resistant to a particular chemotherapy.
FOUR STAGES OF CANCER: Four things affect cancer
survival. One is the stage of its development.
Second is the primary tissue in which it evolved. Each tissue has its
own prognosis. Pancreas has 3 tissues; however, the prognosis is equally dismal
for each tissue—the 5-year survival rate is under 2%. The third factor
is where the mutations have occurred on the sequences of codons[xii] that make up a gene, and also what letter of the codon has been substituted; or if there
was aneuploidy, where that has occurred. Not all mutations of the same gene are
equal. So too does the combination of mutations giving rise to a particular cancer
affect the prognosis, including both the body’s immune response and the effects of chemo and other therapies. These differences create the great variation of responses to treatment for a cancer in the same stage (1
through 4) of the same primary tissue in different patients. The fourth factor
is the cancerous tissues ability to becoming resistant to chemotherapy. If the
tissue posses a process which accelerates genetic diversity, such as the defective spindle formation during mitosis (described
earlier), then the chances of the cancer becoming resistant to chemotherapy are greater than a similar type of cancer without
the defective mitosis. A cancer will be in remission, often for years, and then
suddenly again prove life threatening, and the previous successful chemotherapy proves ineffective. Four factors thus are relevant in making a prediction as to prognosis.
WHY TREATMENT WITH CHEMOTHERAPY IS UNCERTAIN: The
fundamental cause for the difficulty in devising effective noninvasive (radiation, heat, excision, and like are all invasive
and directed at the tumor) methods of treatment for cancer, viz., chemotherapy, is that of finding chemicals that are sufficiently
selective as to primarily target the cancer cells and disrupts their growth while not disrupting normal cells and bodily functions. The difficult arises because cancer cells are genetically nearly identical to normal
cells. In most cases chemotherapy does not eliminate cancer, but rather produces
remission and thus prolongs life.
Chemotherapy is used is most commonly used following invasive treatments
even when there is no clear evidence of metastasis. Studies have shown an improved
survival rate for those who receive chemotherapy as an adjunct to excision for nearly all cancers that have progressed beyond
stage 1.
The three leading avoidable causes of cancer are tobacco smoke, obesity,
and high-fat diet (most carcinogens are fat soluble). Cancer is a crapshoot;
however, risk goes up with age. A 70-year old is 100 times as likely to be diagnosed
with a malignancy as a 19-year old (Gibbs 58). There are 10 million billion cells
that have cooperated in the course of an 80-year life span. Considering this
number of cell, only about 40% of the population will develop a cancer serious enough to result in medical intervention. Nature has endowed us with a set of quite effective safeguards against cancer.
[i] Leukemia is the exception, for it requires as few as 3 genetic events. It doesn’t need to invade adjacent tissue, be immortal for blood cells do not
have nuclei, or pass through capillaries. Being less, entails that for most Leukemia’s, the average age of development
is sooner.
[ii] Telomeres are
specific set of codons at the end of a chromosome. The set is repeated 50 to
70 times. With each cell division one of the telomeres is removed by a specific
enzyme called telomerase. When the last telomere codon is removed, the
cell undergoes senescence. This is one of the mechanisms by which cell
replication and thus cell reproduction is limited.
[iii] In most cervical cancer, for example, a mutation causes the cell-to-cell
adhesive molecule E-carherin to be digested, and as a consequence the cancerous cervical cell line can spread to distant tissues.
[iv] On the surface
of cells are unique small chains of peptides that function as markers recognized by immune cells. If that tissue with that particular type of marker is found among a tissue with a different marker, certain
type of white-blood cells will recognize the migrated tissue as foreign and initiate the events which will result in the destruction
of this foreign tissue. Cancer cells that spread to a distant organ must
go to a tissue type in that organ for which they do not appear foreign (breast cancer often spreads to the brain, for example). Complex organs with many different tissues, such as the brain and the liver, are thus
frequent sites for the primary cancer to metastasize to.
[v] Duplication error
consists of a section of the chromosome strand being made more than normal once. Trisomy
occurs when there is an extra copy of the entire strand. If it occurs
on chromosome 21, it results in Down’s syndrome. Translocation is the shuffling
of a section of one strand onto the other strand. Deletion is where a portion
of one of the strands is not replicated. And inversion is where a section of
a strand is reproduced in the opposite to normal order.
[vi] Ocogensis: the origin and growth of a neoplasm (tumor). The can be either benign or malignant.
[vii] Thus for example in a study of 476 tumors of the thyroid, BRAF oncogene was altered in two-thirds of papillary
thyroid cancers, but not in any other kinds of thyroid cancers. Unfortunately
generalizations have counter examples. Thus oncogene c-fos and c-erbb3 are not
disable but less active than in normal tissue. Conversely RB is more active in
colon cancer, and thus protects the tumor from the auto-destruction mechanism.
For one of the common genes which perform this checking function, P53, between one-third and one-half of the cancers
have this among other mutations (Bailey 137). Genetics and Evolution: The Molecules of Inheritance, Jill Bailey, Oxford University Press, NY, 1995.
[viii] German A. Pihan
and colleagues found and published in March of 04 that of the 116 pre-malignant tumors removed from the tissues of the cervix,
prostate, and breast, that between 30 and 72% had defective process during mitosis, Gibbs at 64.
[ix] Untangling the Roots of Cancer, W. Wayt Gibbs, Scientific American,
11/03, P. 61.
[x] Lengauer and colleagues
exposed human cell lines to toxic levels of a carcinogen in broiled meat. Only
a few cells developed resistance and survived. And all of them were genetically
unstable before exposure to the toxin, Gibbs at 64.
[xi] Thomas Reid of
the national Cancer Institute noted that for colorectal cancer there is aneuploidy of chromosomes 7, 8, 13, or 20, and for
cervical cancer of chromosome 3. He also noted that aneuploidy happened at very
early stage and seems to confer a selective advantage. Reid noted that in the
tissues examined there was a stead increase in the number of abnormal chromosomes as the stage of cancer advanced. It went from 0.2 to 12 for metastatic colon tumors, Gibbs at 64.
[xii] A codon is the
sequence of three consecutive bases on a DNA or mRNA molecule that specify a particular amino acid to be inserted in the production
of a protein. Change a base will in most cases lead to the insertion of a different
amino acid, from among the 21 that are used in the production of proteins.
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